The Taliban members who have fought against US or Afghan forces post 2002 could also be tried by the Afghan government since from an international law point of view they're members of a violent organization fighting against a sovereign government and allied forces who are there legally. The US could also keep them as POW's without trying them beyond ascertaining that they are indeed Taliban members.
It's a little too late for any of these things. When the capital development of a country becomes a by-product of the activities of a casino, the job is likely to be ill-done. — John M. Keynes
Contra stormy, there is no rule that suspects who have been tortured can't be put on trial,
I didn't mean to imply that there was a rule, only that it's unlikely to happen.